Resources

Explore data resources and tools maintained or developed by the Dong Lab, along with recommended resources for learning bioinformatics.

Data

BRAINcode
BRAINcode

Explore gene expression, noncoding transcripts, and regulatory variation in human dopamine neurons.

SLC Atlas
SLC Atlas

Explore solute carrier genes across expression, conservation, genomic context, and protein structure.

PD Brain Atlas
PD Brain Atlas

Explore Parkinson’s brain cell types, spatial organization, and multi-omics data across disease progression.

Tools

powerEQTL
powerEQTL

Calculate sample size and statistical power for bulk tissue and single-cell eQTL studies.

Synorth
Synorth

Explore conserved synteny and long-range regulatory relationships across vertebrate genomes.

EVscope
EVscope

Process extracellular vesicle total RNA-seq with quality control, RNA profiling, and reproducible reports.

VizIt
VizIt

Build interactive web portals to visualize single-cell, spatial, and other multi-omics datasets.

AtlasForge
AtlasForge

Generate interactive gene-family atlases through automated data retrieval and analysis.

Bioinformatics Education

These external resources are highly recommended for learning data visualization, statistics, and genomics.

Data visualization Points of View

The Nature Methods column series on data visualization, published from 2010 to 2016 and renewed in 2026.

Read the 2026 article

Statistics Points of Significance

The Nature Methods column series on statistics, beginning in 2013.

Browse the collection

Genomics PH525x Biomedical Data Science

Learning materials for the PH525x Biomedical Data Science series.

Read the online book